Index A | C | D | E | F | G | I | M | N | P | R | S | T | V A apply_registration() (microcorrelate.core.ImageRegistration method) C create_itk_image() (in module microcorrelate.io) D deep_items() (in module microcorrelate.utils) E extract_integers() (in module microcorrelate.utils) extract_tpef_spacing() (in module microcorrelate.io) F final_transform (microcorrelate.core.ImageRegistration attribute) find_common_vals() (in module microcorrelate.utils) fixed_color (microcorrelate.napari.ViewerParams attribute) fixed_image (microcorrelate.napari.NapariRegistrator attribute) flatten_dict() (in module microcorrelate.utils) G get_crop_idx() (in module microcorrelate.utils) I ImageRegistration (class in microcorrelate.core) M metric_end_plot() (in module microcorrelate.callbacks) metric_plot_values() (in module microcorrelate.callbacks) metric_start_plot() (in module microcorrelate.callbacks) microcorrelate module microcorrelate.callbacks module microcorrelate.core module microcorrelate.io module microcorrelate.napari module microcorrelate.stitching module microcorrelate.utils module module microcorrelate microcorrelate.callbacks microcorrelate.core microcorrelate.io microcorrelate.napari microcorrelate.stitching microcorrelate.utils moving_color (microcorrelate.napari.ViewerParams attribute) N NapariRegistrator (class in microcorrelate.napari) P pts_border_color (microcorrelate.napari.ViewerParams attribute) pts_border_width (microcorrelate.napari.ViewerParams attribute) pts_size (microcorrelate.napari.ViewerParams attribute) R read_laicp_hdf5() (in module microcorrelate.io) read_metadata() (in module microcorrelate.stitching) read_ome_zarr() (in module microcorrelate.io) read_tofsims() (in module microcorrelate.io) read_tpef() (in module microcorrelate.io) register_image() (microcorrelate.napari.NapariRegistrator method) register_images() (in module microcorrelate.core) (microcorrelate.core.ImageRegistration method) resample_to_spacing() (in module microcorrelate.utils) resampled_data (microcorrelate.napari.NapariRegistrator attribute) round_up_multiple() (in module microcorrelate.utils) run() (microcorrelate.napari.NapariRegistrator method) S select_laicp_channels() (in module microcorrelate.io) show_registered() (microcorrelate.napari.NapariRegistrator method) stitch_images() (in module microcorrelate.stitching) StitchConfig (class in microcorrelate.stitching) T tag_metadata_all (microcorrelate.stitching.StitchConfig attribute) tag_metadata_common (microcorrelate.stitching.StitchConfig attribute) text_anchor (microcorrelate.napari.ViewerParams attribute) text_color (microcorrelate.napari.ViewerParams attribute) text_size (microcorrelate.napari.ViewerParams attribute) transform (microcorrelate.napari.NapariRegistrator attribute) V ViewerParams (class in microcorrelate.napari) vprint() (in module microcorrelate.utils)