API Reference# microcorrelate Submodules microcorrelate.callbacks Functions Module Contents metric_end_plot() metric_plot_values() metric_start_plot() microcorrelate.core Classes Functions Module Contents ImageRegistration ImageRegistration.final_transform ImageRegistration.apply_registration() ImageRegistration.register_images() register_images() microcorrelate.io Functions Module Contents create_itk_image() extract_tpef_spacing() read_laicp_hdf5() read_ome_zarr() read_tofsims() read_tpef() select_laicp_channels() microcorrelate.napari Classes Module Contents NapariRegistrator NapariRegistrator.fixed_image NapariRegistrator.transform NapariRegistrator.resampled_data NapariRegistrator.register_image() NapariRegistrator.run() NapariRegistrator.show_registered() ViewerParams ViewerParams.fixed_color ViewerParams.moving_color ViewerParams.pts_size ViewerParams.pts_border_width ViewerParams.pts_border_color ViewerParams.text_color ViewerParams.text_size ViewerParams.text_anchor microcorrelate.stitching Classes Functions Module Contents StitchConfig StitchConfig.tag_metadata_common StitchConfig.tag_metadata_all read_metadata() stitch_images() microcorrelate.utils Functions Module Contents deep_items() extract_integers() find_common_vals() flatten_dict() get_crop_idx() resample_to_spacing() round_up_multiple() vprint()